Geniml

MCP Server

by hxk622 · Added 5mo ago

Claude
4

Install

git clone https://github.com/hxk622/TokenDance

Add to Claude

claude mcp add geniml

Quick Setup Config

Copy & paste ready

~/Library/Application Support/Claude/claude_desktop_config.json (macOS) %APPDATA%\Claude\claude_desktop_config.json (Windows)

{
  "mcpServers": {
    "geniml": {
      "command": "npx",
      "args": [
        "@modelcontextprotocol/geniml"
      ]
    }
  }
}

Paste into your Claude Desktop config file, then restart Claude.

About

This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.

Tags

ai-mlpythongobashgitskill

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