Matchms
MCP Serverby hxk622 · Added 5mo ago
Claude
4
Install
git clone https://github.com/hxk622/TokenDanceAdd to Claude
claude mcp add matchmsQuick Setup Config
Copy & paste ready~/Library/Application Support/Claude/claude_desktop_config.json (macOS) %APPDATA%\Claude\claude_desktop_config.json (Windows)
{
"mcpServers": {
"matchms": {
"command": "npx",
"args": [
"@modelcontextprotocol/matchms"
]
}
}
}Paste into your Claude Desktop config file, then restart Claude.
About
Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral matching, library searching. For full LC-MS/MS proteomics pipelines use pyopenms.
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